Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14162 and 14163 are separated by 295 nucleotides14163 and 14164 overlap by 20 nucleotides14164 and 14165 are separated by 1613 nucleotides14165 and 14166 are separated by 256 nucleotides mRNA_5794: 14162 - K01637 E4.1.3.1, aceA isocitrate lyase, at 955,473 to 957,559 14162 mRNA_5795: 14163 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 957,855 to 959,394 14163 mRNA_5796: 14164 - BLAST Protein of unknown function DUF4598 [Xanthophyllomyce..., at 959,375 to 960,569 14164 mRNA_5797: 14165 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 962,183 to 965,371 14165 mRNA_5798: 14166 - KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein, at 965,628 to 966,973 14166
Group Condition mRNA_5794 mRNA_5795 mRNA_5796 mRNA_5797 mRNA_5798
14162 14163 14164 14165 14166
facs on lipid accumulation Sorted High BODIPY Gate -1.0 -0.4 +0.1 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.7 -0.4 -0.1 +0.0 +0.2
growth on oleic acid YNB Oleic Acid -0.6 -0.0 -0.1 -0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 -0.4 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 -0.1 -0.2 -0.2
growth on oleic acid YNB Glucose -0.1 -0.2 -0.1 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 -0.4 +0.5 +0.4
growth on ypd YPD -0.1 +0.2 +0.2 -0.4 -0.0
auxotrophy YNB Glucose +0.3 -0.5 +0.2 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.0 -0.1 +0.1
auxotrophy Dropout Complete +0.3 -0.5 -0.1 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 +0.0 +0.8 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.0 +0.2 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 -0.1 -0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 -0.0 +0.4 +0.4 +0.5
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 +0.4 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.2 +0.3 -0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 +0.0 -0.4 +0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.5 +0.3 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.3 +0.2 +0.9 -0.0
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.2 +0.3 +0.4
remove
mRNA_5794
plot
remove
mRNA_5795
plot
remove
mRNA_5796
remove
mRNA_5797
plot
remove
mRNA_5798
plot