Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14166 and 14167 are separated by 216 nucleotides14167 and 14168 are separated by 334 nucleotides14168 and 14169 are separated by 265 nucleotides14169 and 14170 are separated by 156 nucleotides mRNA_5798: 14166 - KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein, at 965,628 to 966,973 14166 mRNA_5799: 14167 - K09540 SEC63, DNAJC23 translocation protein SEC63, at 967,190 to 969,688 14167 mRNA_5800: 14168 - K11801 WDR23 WD repeat-containing protein 23, at 970,023 to 972,593 14168 mRNA_5801: 14169 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 972,859 to 974,663 14169 mRNA_5802: 14170 - K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase, at 974,820 to 975,968 14170
Group Condition mRNA_5798 mRNA_5799 mRNA_5800 mRNA_5801 mRNA_5802
14166 14167 14168 14169 14170
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.2 -1.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. -0.2 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.2 -0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.2 -0.4 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. +0.2 -0.4 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.2 -0.0 +0.0
growth on ypd YPD -0.0 N.D. -0.0 -0.1 -0.2
auxotrophy YNB Glucose +0.1 N.D. -0.2 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.2 -0.0 +0.0
growth on oleic acid YNB Glucose -0.1 N.D. +0.1 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.3 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. +0.2 +0.2 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.0 +0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.1 +0.0 -0.1
growth on ricinoleic acid YNB Glucose +0.4 N.D. -0.0 +0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. +0.0 +0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.6 N.D. +0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.1 +0.2 -0.2
auxotrophy Dropout Complete +0.5 N.D. +0.1 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. -0.1 -0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. -0.2 +0.1 +0.4
remove
mRNA_5798
plot
remove
mRNA_5799
plot
remove
mRNA_5800
remove
mRNA_5801
plot
remove
mRNA_5802
plot