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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14168 and 14169 are separated by 265 nucleotides
14169 and 14170 are separated by 156 nucleotides
14170 and 14171 are separated by 326 nucleotides
14171 and 14172 are separated by 635 nucleotides
mRNA_5800: 14168 - K11801 WDR23 WD repeat-containing protein 23, at 970,023 to 972,593
14168
mRNA_5801: 14169 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 972,859 to 974,663
14169
mRNA_5802: 14170 - K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase, at 974,820 to 975,968
14170
mRNA_5803: 14171 - Hypothetical Protein, at 976,295 to 977,367
14171
mRNA_5804: 14172 - Hypothetical Protein, at 978,003 to 978,815
14172
Group
Condition
mRNA
_5800
mRNA
_5801
mRNA
_5802
mRNA
_5803
mRNA
_5804
14168
14169
14170
14171
14172
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.4
-0.7
-0.4
-1.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-1.0
-0.6
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
+0.0
-0.3
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
-0.1
+0.1
-0.3
growth on oleic acid
YNB Oleic Acid
+0.2
-0.4
-0.4
-0.3
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.0
-0.5
-0.3
+0.6
growth on ypd
YPD
-0.0
-0.1
-0.2
-0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
-0.2
+0.3
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.0
-0.1
-0.2
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.1
+0.4
+0.1
-0.8
growth on ricinoleic acid
YNB Glucose
-0.0
+0.0
-0.1
+0.4
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.0
+0.0
-0.1
+0.2
auxotrophy
YNB Glucose
-0.2
+0.1
-0.3
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.0
+0.2
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.2
-0.6
-0.2
+0.5
growth on oleic acid
YNB Glucose
+0.1
+0.2
-0.2
-0.1
+0.3
auxotrophy
Dropout Complete
+0.1
+0.1
-0.1
-0.2
+0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
-0.1
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.2
-0.2
-0.2
+0.7
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.4
-0.2
-0.0
+0.6
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.0
+0.1
+0.5
+0.7
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