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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14171 and 14172 are separated by 635 nucleotides
14172 and 14173 are separated by 192 nucleotides
14173 and 14174 are separated by 751 nucleotides
14174 and 14175 are separated by 555 nucleotides
mRNA_5803: 14171 - Hypothetical Protein, at 976,295 to 977,367
14171
mRNA_5804: 14172 - Hypothetical Protein, at 978,003 to 978,815
14172
mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979,008 to 980,217
14173
mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980,969 to 985,772
14174
mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986,328 to 987,350
14175
Group
Condition
mRNA
_5803
mRNA
_5804
mRNA
_5805
mRNA
_5806
mRNA
_5807
14171
14172
14173
14174
14175
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.3
-1.3
-0.3
-2.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.6
+0.3
-0.3
-1.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.8
-0.8
+0.1
+0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.8
+1.2
+0.2
-1.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.6
+0.2
-0.2
-1.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.5
+0.9
-0.7
+1.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.2
-0.7
+0.3
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.3
-0.4
+0.3
+0.8
growth on oleic acid
YNB Glucose
-0.1
+0.3
+0.0
+0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.2
+0.7
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.1
+0.9
-0.1
+0.4
growth on ypd
YPD
-0.1
+0.0
+0.0
+0.7
+0.5
growth on ricinoleic acid
YNB Glucose
+0.4
-0.5
+0.8
-0.3
+0.7
ypd buoyancy
40 hrs Low Buoyancy
+0.5
+0.7
+0.8
-0.3
-0.4
growth on oleic acid
YNB Oleic Acid
-0.3
+0.4
-0.3
+0.5
+1.0
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.4
+1.1
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.3
+0.4
+0.9
+0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.7
+1.1
+0.4
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.5
+1.4
+0.2
+0.3
auxotrophy
Dropout Complete
-0.2
+0.6
+1.4
+0.1
+0.4
auxotrophy
YNB Glucose
+0.1
+0.2
+1.5
+0.1
+1.1
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