Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14172 and 14173 are separated by 192 nucleotides14173 and 14174 are separated by 751 nucleotides14174 and 14175 are separated by 555 nucleotides14175 and 14176 are separated by 207 nucleotides mRNA_5804: 14172 - Hypothetical Protein, at 978,003 to 978,815 14172 mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979,008 to 980,217 14173 mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980,969 to 985,772 14174 mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986,328 to 987,350 14175 mRNA_5808: 14176 - HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695, at 987,558 to 988,212 14176
Group Condition mRNA_5804 mRNA_5805 mRNA_5806 mRNA_5807 mRNA_5808
14172 14173 14174 14175 14176
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -1.3 -0.3 -2.3 -1.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 +1.2 +0.2 -1.5 -1.4
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.3 -0.3 -1.8 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -0.8 +0.1 +0.9 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.9 -0.1 +0.4 -2.0
ypd buoyancy 40 hrs No Buoyancy Separation -1.5 +0.9 -0.7 +1.8 -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.7 +0.3 +0.6 -0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.6 +0.2 -0.2 -1.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.7 -0.2 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.7 +0.8 -0.3 -0.4 -0.3
growth on oleic acid YNB Glucose +0.3 +0.0 +0.3 +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.5 +0.8 -0.3 +0.7 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.4 +0.3 +0.8 +0.6
growth on oleic acid YNB Oleic Acid +0.4 -0.3 +0.5 +1.0 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.4 +1.1 +0.2 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.4 +0.9 +0.9 -0.2
growth on ypd YPD +0.0 +0.0 +0.7 +0.5 +0.7
auxotrophy YNB Glucose 75mM Methionine +0.5 +1.4 +0.2 +0.3 +1.0
auxotrophy Dropout Complete +0.6 +1.4 +0.1 +0.4 +1.1
auxotrophy YNB Glucose 75mM Arginine +0.7 +1.1 +0.4 +0.3 +1.3
auxotrophy YNB Glucose +0.2 +1.5 +0.1 +1.1 +1.0
remove
mRNA_5804
plot
remove
mRNA_5805
plot
remove
mRNA_5806
remove
mRNA_5807
plot
remove
mRNA_5808
plot