Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14174 and 14175 are separated by 555 nucleotides14175 and 14176 are separated by 207 nucleotides14176 and 14177 are separated by 116 nucleotides14177 and 14178 are separated by 250 nucleotides mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980,969 to 985,772 14174 mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986,328 to 987,350 14175 mRNA_5808: 14176 - HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695, at 987,558 to 988,212 14176 mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988,329 to 990,216 14177 mRNA_5810: 14178 - K02730 PSMA6 20S proteasome subunit alpha 1, at 990,467 to 991,553 14178
Group Condition mRNA_5806 mRNA_5807 mRNA_5808 mRNA_5809 mRNA_5810
14174 14175 14176 14177 14178
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -2.3 -1.1 +0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -1.5 -1.4 -0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.4 -2.0 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.4 -0.3 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.1 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -1.0 +0.0 +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -1.8 -0.0 +1.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.6 -0.8 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +1.8 -1.0 -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.7 +0.2 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.5 +1.0 -0.3 -0.7 N.D.
growth on oleic acid YNB Glucose +0.3 +0.1 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.9 -0.3 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.5 +0.0 +0.3 N.D.
growth on ypd YPD +0.7 +0.5 +0.7 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.8 +0.6 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 +0.9 -0.2 -0.1 N.D.
auxotrophy Dropout Complete +0.1 +0.4 +1.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.3 +1.3 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.3 +1.0 +0.6 N.D.
auxotrophy YNB Glucose +0.1 +1.1 +1.0 +0.2 N.D.
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