Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14174 and 14175 are separated by 555 nucleotides
14175 and 14176 are separated by 207 nucleotides
14176 and 14177 are separated by 116 nucleotides
14177 and 14178 are separated by 250 nucleotides
mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980,969 to 985,772
14174
mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986,328 to 987,350
14175
mRNA_5808: 14176 - HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695, at 987,558 to 988,212
14176
mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988,329 to 990,216
14177
mRNA_5810: 14178 - K02730 PSMA6 20S proteasome subunit alpha 1, at 990,467 to 991,553
14178
Group
Condition
mRNA
_5806
mRNA
_5807
mRNA
_5808
mRNA
_5809
mRNA
_5810
14174
14175
14176
14177
14178
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-2.3
-1.1
+0.5
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-1.5
-1.4
-0.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.4
-2.0
-0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.4
-0.3
-0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
-0.1
-0.5
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-1.0
+0.0
+0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.8
-0.0
+1.3
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.6
-0.8
-0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+1.8
-1.0
-0.0
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
+0.7
+0.2
-0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.5
+1.0
-0.3
-0.7
N.D.
growth on oleic acid
YNB Glucose
+0.3
+0.1
+0.1
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.9
-0.3
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.5
+0.0
+0.3
N.D.
growth on ypd
YPD
+0.7
+0.5
+0.7
-0.7
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.8
+0.6
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.9
+0.9
-0.2
-0.1
N.D.
auxotrophy
Dropout Complete
+0.1
+0.4
+1.1
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.4
+0.3
+1.3
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.3
+1.0
+0.6
N.D.
auxotrophy
YNB Glucose
+0.1
+1.1
+1.0
+0.2
N.D.
remove
mRNA_5806
plot
remove
mRNA_5807
plot
remove
mRNA_5808
remove
mRNA_5809
plot
remove
mRNA_5810
plot