Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14176 and 14177 are separated by 116 nucleotides14177 and 14178 are separated by 250 nucleotides14178 and 14179 are separated by 640 nucleotides14179 and 14180 are separated by 255 nucleotides mRNA_5808: 14176 - HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695, at 987,558 to 988,212 14176 mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988,329 to 990,216 14177 mRNA_5810: 14178 - K02730 PSMA6 20S proteasome subunit alpha 1, at 990,467 to 991,553 14178 mRNA_5811: 14179 - K01599 hemE, UROD uroporphyrinogen decarboxylase, at 992,194 to 993,567 14179 mRNA_5812: 14180 - K02831 RAD53 ser/thr/tyr protein kinase RAD53, at 993,823 to 996,800 14180
Group Condition mRNA_5808 mRNA_5809 mRNA_5810 mRNA_5811 mRNA_5812
14176 14177 14178 14179 14180
growth on ricinoleic acid YNB Methylricinoleic Acid -2.0 -0.3 N.D. N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.4 N.D. N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.7 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 -0.2 N.D. N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.0 N.D. N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.5 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.1 N.D. N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 +0.5 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.4 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 N.D. N.D. +0.1
growth on ypd YPD +0.7 -0.7 N.D. N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.2 -0.1 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.3 N.D. N.D. -0.0
growth on oleic acid YNB Glucose +0.1 +0.2 N.D. N.D. +0.0
auxotrophy Dropout Complete +1.1 -0.1 N.D. N.D. -0.4
auxotrophy YNB Glucose +1.0 +0.2 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine +1.3 +0.1 N.D. N.D. -0.5
auxotrophy YNB Glucose 75mM Methionine +1.0 +0.6 N.D. N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +1.3 N.D. N.D. -0.1
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