Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14177 and 14178 are separated by 250 nucleotides14178 and 14179 are separated by 640 nucleotides14179 and 14180 are separated by 255 nucleotides14180 and 14181 are separated by 189 nucleotides mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988,329 to 990,216 14177 mRNA_5810: 14178 - K02730 PSMA6 20S proteasome subunit alpha 1, at 990,467 to 991,553 14178 mRNA_5811: 14179 - K01599 hemE, UROD uroporphyrinogen decarboxylase, at 992,194 to 993,567 14179 mRNA_5812: 14180 - K02831 RAD53 ser/thr/tyr protein kinase RAD53, at 993,823 to 996,800 14180 mRNA_5813: 14181 - K15340 DCLRE1A, SNM1A, PSO2 DNA cross-link repair 1A protein, at 996,990 to 1,000,538 14181
Group Condition mRNA_5809 mRNA_5810 mRNA_5811 mRNA_5812 mRNA_5813
14177 14178 14179 14180 14181
growth on oleic acid YNB Oleic Acid -0.7 N.D. N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. N.D. -0.4 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. N.D. -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. N.D. -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 N.D. N.D. -0.1 +0.0
growth on ypd YPD -0.7 N.D. N.D. -0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. N.D. -0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.4 -0.1
auxotrophy Dropout Complete -0.1 N.D. N.D. -0.4 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. N.D. -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. N.D. -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. N.D. -0.1 +0.2
growth on ricinoleic acid YNB Glucose -0.1 N.D. N.D. -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. N.D. -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. N.D. +0.3 -0.3
auxotrophy YNB Glucose +0.2 N.D. N.D. -0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.6 N.D. N.D. -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. N.D. +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. N.D. +0.0 -0.4
growth on oleic acid YNB Glucose +0.2 N.D. N.D. +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +1.3 N.D. N.D. -0.1 -0.2
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