Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14194 and 14195 are separated by 382 nucleotides14195 and 14196 are separated by 418 nucleotides14196 and 14197 are separated by 179 nucleotides14197 and 14198 are separated by 452 nucleotides mRNA_5826: 14194 - SUPERFAMILY--SSF52047, at 1,033,678 to 1,034,925 14194 mRNA_5827: 14195 - K04518 pheA2 prephenate dehydratase, at 1,035,308 to 1,036,218 14195 mRNA_5828: 14196 - KOG0725 Reductases with broad range of substrate specificities, at 1,036,637 to 1,037,941 14196 mRNA_5829: 14197 - K00228 CPOX, hemF coproporphyrinogen III oxidase, at 1,038,121 to 1,039,722 14197 mRNA_5830: 14198 - HMMPfam-Mitochondrial protein Pet127-PF08634, at 1,040,175 to 1,043,789 14198
Group Condition mRNA_5826 mRNA_5827 mRNA_5828 mRNA_5829 mRNA_5830
14194 14195 14196 14197 14198
auxotrophy YNB Glucose 75mM Methionine -0.5 -3.5 -0.0 +0.2 N.D.
auxotrophy YNB Glucose +0.1 -4.2 -0.0 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -2.4 +0.0 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -3.3 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.3 -3.2 +0.1 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -2.2 -0.3 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -3.4 -0.0 +0.4 N.D.
auxotrophy Dropout Complete +0.1 -3.1 -0.2 +0.3 N.D.
growth on oleic acid YNB Glucose +0.2 -3.4 +0.1 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.3 -3.2 +0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.0 -4.0 +0.3 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.5 -3.9 +0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.2 -3.6 +0.2 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -1.6 -0.1 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -2.1 +0.2 +0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.3 -0.8 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.9 -2.7 +0.0 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.2 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.3 -0.0 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 -0.1 +0.0 N.D.
growth on ypd YPD +1.2 -0.3 -0.1 -0.0 N.D.
remove
mRNA_5826
plot
remove
mRNA_5827
plot
remove
mRNA_5828
remove
mRNA_5829
plot
remove
mRNA_5830
plot