Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14197 and 14198 are separated by 452 nucleotides14198 and 14199 are separated by 136 nucleotides14199 and 14200 are separated by 272 nucleotides14200 and 14201 are separated by 101 nucleotides mRNA_5829: 14197 - K00228 CPOX, hemF coproporphyrinogen III oxidase, at 1,038,121 to 1,039,722 14197 mRNA_5830: 14198 - HMMPfam-Mitochondrial protein Pet127-PF08634, at 1,040,175 to 1,043,789 14198 mRNA_5831: 14199 - KOG1198 Zinc-binding oxidoreductase, at 1,043,926 to 1,045,308 14199 mRNA_5832: 14200 - K02863 RP-L1, MRPL1, rplA large subunit ribosomal protein L1, at 1,045,581 to 1,047,659 14200 mRNA_5833: 14201 - K09705 K09705 uncharacterized protein, at 1,047,761 to 1,048,668 14201
Group Condition mRNA_5829 mRNA_5830 mRNA_5831 mRNA_5832 mRNA_5833
14197 14198 14199 14200 14201
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -0.0 -0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.3 -0.2 -0.2
growth on ypd YPD -0.0 N.D. +0.4 -0.9 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.3 -0.6 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. +0.1 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.3 -0.4 -0.3
auxotrophy Dropout Complete +0.3 N.D. +0.0 -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. +0.2 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. +0.4 -0.1 -0.2
growth on oleic acid YNB Glucose +0.2 N.D. -0.1 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.6 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.3 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.4 +0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.1 +0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. -0.0 +0.0 +0.1
auxotrophy YNB Glucose +0.4 N.D. +0.3 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.2 +0.1 +0.6
growth on oleic acid YNB Oleic Acid -0.0 N.D. +0.2 +0.3 +0.1
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.3 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.5 +0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.3 +0.5 +0.0
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