Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14200 and 14201 are separated by 101 nucleotides14201 and 14202 are separated by 277 nucleotides14202 and 14204 are separated by 544 nucleotides14204 and 14203 are separated by 119 nucleotides mRNA_5832: 14200 - K02863 RP-L1, MRPL1, rplA large subunit ribosomal protein L1, at 1,045,581 to 1,047,659 14200 mRNA_5833: 14201 - K09705 K09705 uncharacterized protein, at 1,047,761 to 1,048,668 14201 mRNA_5834: 14202 - HMMPfam-Protein of unknown function (DUF1688)-PF07958, at 1,048,946 to 1,050,486 14202 mRNA_5836: 14204 - Hypothetical Protein, at 1,051,031 to 1,051,324 14204 mRNA_5835: 14203 - Hypothetical Protein, at 1,051,444 to 1,053,111 14203
Group Condition mRNA_5832 mRNA_5833 mRNA_5834 mRNA_5836 mRNA_5835
14200 14201 14202 14204 14203
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 -1.0 -1.5 -1.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 -0.1 -0.7 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.6 -0.2 -0.1 -0.1 -0.5
auxotrophy YNB Glucose +0.1 -0.3 -0.7 +0.3 -0.3
auxotrophy Dropout Complete -0.1 -0.4 -0.1 +0.3 -0.4
growth on ypd YPD -0.9 -0.2 -0.2 +0.4 +0.2
growth on oleic acid YNB Oleic Acid +0.3 +0.1 -0.5 -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.2 -0.3 -0.1
growth on oleic acid YNB Glucose +0.1 -0.0 -0.2 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.4 -0.3 +0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.2 -0.1 -1.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 +0.3 -0.8 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.0 -0.8 +0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.1 +0.4 -0.6 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.3 -0.1 -0.6 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.3 +0.4 -0.4 +0.7
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.0 +0.3 +0.3 +0.1
growth on ricinoleic acid YNB Glucose +0.3 +0.2 -0.4 -0.5 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 +0.6 -0.3 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.6 -0.7 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.1 +0.4 -0.1 +0.4
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