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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14204 and 14203 are separated by 119 nucleotides
14203 and 14205 are separated by 68 nucleotides
14205 and 14206 are separated by 187 nucleotides
14206 and 14207 are separated by 622 nucleotides
mRNA_5836: 14204 - Hypothetical Protein, at 1,051,031 to 1,051,324
14204
mRNA_5835: 14203 - Hypothetical Protein, at 1,051,444 to 1,053,111
14203
mRNA_5837: 14205 - Hypothetical Protein, at 1,053,180 to 1,053,560
14205
mRNA_5838: 14206 - Hypothetical Protein, at 1,053,748 to 1,057,363
14206
mRNA_5839: 14207 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 1,057,986 to 1,059,874
14207
Group
Condition
mRNA
_5836
mRNA
_5835
mRNA
_5837
mRNA
_5838
mRNA
_5839
14204
14203
14205
14206
14207
ypd buoyancy
40 hrs No Buoyancy Separation
-1.5
-1.2
-1.3
+0.2
+0.0
growth on oleic acid
YNB Oleic Acid
-0.5
-0.1
-0.2
-0.7
-0.0
auxotrophy
Dropout Complete
+0.3
-0.4
-0.3
-0.7
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
+0.7
+0.4
-2.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.0
+0.5
+0.3
-1.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.5
-0.2
-0.4
+0.0
auxotrophy
YNB Glucose
+0.3
-0.3
-0.3
-0.8
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
-0.2
-0.5
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.2
-0.3
-0.7
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.7
-0.3
-0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.5
+0.3
+0.4
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.0
+0.2
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.6
+0.1
-0.4
-0.2
growth on ricinoleic acid
YNB Glucose
-0.5
+0.7
+0.2
-0.9
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
+0.1
+0.4
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
+0.5
+0.4
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.1
+0.0
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.4
-0.1
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.1
-0.1
-0.1
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.5
-0.2
+0.2
-0.1
growth on ypd
YPD
+0.4
+0.2
+0.6
+0.1
+0.0
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