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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14205 and 14206 are separated by 187 nucleotides
14206 and 14207 are separated by 622 nucleotides
14207 and 14208 are separated by 286 nucleotides
14208 and 14209 are separated by 230 nucleotides
mRNA_5837: 14205 - Hypothetical Protein, at 1,053,180 to 1,053,560
14205
mRNA_5838: 14206 - Hypothetical Protein, at 1,053,748 to 1,057,363
14206
mRNA_5839: 14207 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 1,057,986 to 1,059,874
14207
mRNA_5840: 14208 - Hypothetical Protein, at 1,060,161 to 1,062,503
14208
mRNA_5841: 14209 - KOG1577 Aldo/keto reductase family proteins, at 1,062,734 to 1,064,125
14209
Group
Condition
mRNA
_5837
mRNA
_5838
mRNA
_5839
mRNA
_5840
mRNA
_5841
14205
14206
14207
14208
14209
auxotrophy
Dropout Complete
-0.3
-0.7
-0.4
+0.0
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-2.1
+0.2
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.4
-0.2
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.3
-0.4
-0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.3
+0.2
+0.0
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
-0.1
-0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.7
-0.3
+0.3
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.4
+0.0
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.5
+0.1
-0.1
-0.0
auxotrophy
YNB Glucose
-0.3
-0.8
+0.0
+0.3
+0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.7
-0.0
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.2
-0.4
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-1.1
+0.1
-0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.2
-0.1
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.5
-0.0
+0.3
+0.0
growth on ricinoleic acid
YNB Glucose
+0.2
-0.9
+0.3
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.2
-0.1
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.4
-0.1
-0.3
-0.2
growth on oleic acid
YNB Glucose
+0.2
-0.4
-0.1
+0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.2
+0.1
-0.1
+0.1
growth on ypd
YPD
+0.6
+0.1
+0.0
+0.0
+0.2
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