Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14214 and 14215 are separated by 719 nucleotides14215 and 14216 are separated by 735 nucleotides14216 and 14217 are separated by 1036 nucleotides14217 and 14218 are separated by 665 nucleotides mRNA_5846: 14214 - K04508 TBL1 transducin (beta)-like 1, at 1,073,659 to 1,076,277 14214 mRNA_5847: 14215 - K17780 TIM8 mitochondrial import inner membrane translocase subunit TIM8, at 1,076,997 to 1,077,527 14215 mRNA_5848: 14216 - Hypothetical Protein, at 1,078,263 to 1,078,813 14216 mRNA_5849: 14217 - SMART-Furin-like repeats-SM00261,SUPERFAMILY--SSF57184, at 1,079,850 to 1,082,159 14217 mRNA_5850: 14218 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 1,082,825 to 1,084,341 14218
Group Condition mRNA_5846 mRNA_5847 mRNA_5848 mRNA_5849 mRNA_5850
14214 14215 14216 14217 14218
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 -0.8 -0.4 -0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -1.4 +0.4 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.2 -0.3 -0.7 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 -0.2 -0.2 -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.1 +0.2 -0.3 +0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.5 +0.2 -0.1 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.4 -0.0 -0.1 +0.2
auxotrophy Dropout Complete +0.5 -0.9 -0.2 -0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +1.1 -1.1 +0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.9 -0.6 -0.7 -0.1 +0.2
auxotrophy YNB Glucose +0.6 -0.8 -0.1 -0.3 +0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.0 -0.2 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.3 +0.3 +0.0
growth on ypd YPD -0.3 +0.3 +0.6 -0.3 -0.2
growth on oleic acid YNB Glucose -0.2 +0.5 -0.2 -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.9 -0.7 -0.2 -0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.4 -0.0 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.1 -0.3 -0.4 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 -0.2 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 -0.0 -0.4 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.1 +0.2 -0.2 +0.2
remove
mRNA_5846
plot
remove
mRNA_5847
plot
remove
mRNA_5848
remove
mRNA_5849
plot
remove
mRNA_5850
plot