Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14228 and 14229 are separated by 333 nucleotides14229 and 14230 are separated by 1759 nucleotides14230 and 14231 are separated by 210 nucleotides14231 and 14232 are separated by 210 nucleotides mRNA_5860: 14228 - K19770 RNASEK ribonuclease kappa, at 1,104,948 to 1,105,402 14228 mRNA_5861: 14229 - K16261 YAT yeast amino acid transporter, at 1,105,736 to 1,108,814 14229 mRNA_5862: 14230 - K14998 SURF1, SHY1 surfeit locus 1 family protein, at 1,110,574 to 1,111,803 14230 mRNA_5863: 14231 - K09281 K09281 copper-fist transcription factor, at 1,112,014 to 1,113,676 14231 mRNA_5864: 14232 - K01322 PREP prolyl oligopeptidase, at 1,113,887 to 1,116,821 14232
Group Condition mRNA_5860 mRNA_5861 mRNA_5862 mRNA_5863 mRNA_5864
14228 14229 14230 14231 14232
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.1 +0.2 -2.7 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.2 -1.1 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.2 -0.9 -0.8 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.2 -1.4 -0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.4 +0.1 -1.0 -0.2
growth on ricinoleic acid YNB Glucose -0.6 +0.0 -0.6 -0.5 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.3 +0.2 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.6 +0.1 -0.3 -1.5 -0.0
growth on oleic acid YNB Glucose +0.0 -0.2 +0.2 +0.2 -0.3
auxotrophy YNB Glucose +0.0 -0.0 -0.4 +0.8 -0.0
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.2 +0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 +0.4 +0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.0 +0.6 +0.5 -0.0
auxotrophy Dropout Complete -0.1 +0.1 +0.1 +0.9 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.6 +0.1 +0.1 +0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 -0.7 +1.2 +0.1
growth on ypd YPD +0.4 +0.2 -0.2 +1.7 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 -0.2 +3.4 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.0 +0.9 +3.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 +0.6 +3.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 +0.8 +2.9 -0.0
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