Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14229 and 14230 are separated by 1759 nucleotides14230 and 14231 are separated by 210 nucleotides14231 and 14232 are separated by 210 nucleotides14232 and 14233 are separated by 275 nucleotides mRNA_5861: 14229 - K16261 YAT yeast amino acid transporter, at 1,105,736 to 1,108,814 14229 mRNA_5862: 14230 - K14998 SURF1, SHY1 surfeit locus 1 family protein, at 1,110,574 to 1,111,803 14230 mRNA_5863: 14231 - K09281 K09281 copper-fist transcription factor, at 1,112,014 to 1,113,676 14231 mRNA_5864: 14232 - K01322 PREP prolyl oligopeptidase, at 1,113,887 to 1,116,821 14232 mRNA_5865: 14233 - KOG0800 FOG Predicted E3 ubiquitin ligase, at 1,117,097 to 1,118,879 14233
Group Condition mRNA_5861 mRNA_5862 mRNA_5863 mRNA_5864 mRNA_5865
14229 14230 14231 14232 14233
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.2 -2.7 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -1.4 -0.5 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 -1.5 -0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -1.1 -0.4 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.1 -1.0 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.9 -0.8 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.2 -0.2 -0.3 -0.2
growth on ricinoleic acid YNB Glucose +0.0 -0.6 -0.5 -0.0 +0.3
growth on oleic acid YNB Glucose -0.2 +0.2 +0.2 -0.3 +0.0
auxotrophy YNB Glucose -0.0 -0.4 +0.8 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.4 +0.4 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.2 +0.0 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.2 +0.5 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.7 +1.2 +0.1 -0.1
auxotrophy Dropout Complete +0.1 +0.1 +0.9 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.6 +0.5 -0.0 -0.2
growth on ypd YPD +0.2 -0.2 +1.7 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 +3.4 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.8 +2.9 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.6 +3.5 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.9 +3.2 -0.0 +0.4
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