Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14236 and 14237 are separated by 341 nucleotides14237 and 14238 are separated by 193 nucleotides14238 and 14239 are separated by 580 nucleotides14239 and 14240 are separated by 119 nucleotides mRNA_5868: 14236 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 1,123,241 to 1,124,381 14236 mRNA_5869: 14237 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 1,124,723 to 1,126,548 14237 mRNA_5870: 14238 - Hypothetical Protein, at 1,126,742 to 1,127,263 14238 mRNA_5871: 14239 - HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 1,127,844 to 1,131,373 14239 mRNA_5872: 14240 - HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233, at 1,131,493 to 1,135,652 14240
Group Condition mRNA_5868 mRNA_5869 mRNA_5870 mRNA_5871 mRNA_5872
14236 14237 14238 14239 14240
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. -0.4 -0.0 -2.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -0.1 -0.1 -2.4
growth on oleic acid YNB Glucose -0.6 N.D. +0.2 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.3 N.D. -0.2 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. +0.0 -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.5 N.D. -0.3 -0.4 -0.4
auxotrophy Dropout Complete -0.2 N.D. +0.0 +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. +0.1 -0.1 +0.0
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.0 +0.1 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.3 +0.1 +0.3
auxotrophy YNB Glucose -0.1 N.D. -0.2 +0.1 +0.3
growth on ypd YPD +0.3 N.D. -0.1 +0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.1 +0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.1 -0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.1 -0.0 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 N.D. +0.1 -0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. +0.6 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 N.D. +0.5 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 N.D. +0.2 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.1 N.D. +0.1 -0.0 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.2 N.D. +0.8 +0.4 -0.0
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