Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14239 and 14240 are separated by 119 nucleotides14240 and 14241 are separated by 427 nucleotides14241 and 14242 are separated by 834 nucleotides14242 and 14243 are separated by 202 nucleotides mRNA_5871: 14239 - HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 1,127,844 to 1,131,373 14239 mRNA_5872: 14240 - HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233, at 1,131,493 to 1,135,652 14240 mRNA_5873: 14241 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 1,136,080 to 1,137,305 14241 mRNA_5874: 14242 - K04536 GNB1 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, at 1,138,140 to 1,139,450 14242 mRNA_5875: 14243 - Hypothetical Protein, at 1,139,653 to 1,140,264 14243
Group Condition mRNA_5871 mRNA_5872 mRNA_5873 mRNA_5874 mRNA_5875
14239 14240 14241 14242 14243
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 -4.6 +0.4 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.0 -3.1 -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.3 -1.3 -0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.4 -1.2 +0.6 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -2.4 -0.0 +1.3 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.5 +0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 -0.3 +0.4 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -2.0 +0.5 +1.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.0 -0.2 -0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.4 -0.5 +0.1 -0.0
growth on ypd YPD +0.3 -0.2 +0.1 +0.1 -0.3
auxotrophy Dropout Complete +0.0 -0.2 +0.1 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 +0.0 +0.3 -0.0
growth on oleic acid YNB Glucose -0.1 -0.2 +0.2 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.6 -0.2 +0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.3 +0.1 +0.3 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.2 +0.2 +0.5 +0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.6 +0.5 +0.7 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 +0.1 +0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.3 +0.0 +0.7 +0.1
auxotrophy YNB Glucose +0.1 +0.3 +0.4 +0.5 +0.0
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