Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14242 and 14243 are separated by 202 nucleotides14243 and 14244 are separated by 1042 nucleotides14244 and 14245 are separated by 345 nucleotides14245 and 14246 are separated by 182 nucleotides mRNA_5874: 14242 - K04536 GNB1 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, at 1,138,140 to 1,139,450 14242 mRNA_5875: 14243 - Hypothetical Protein, at 1,139,653 to 1,140,264 14243 mRNA_5876: 14244 - K14537 NUG2, GNL2 nuclear GTP-binding protein, at 1,141,307 to 1,144,033 14244 mRNA_5877: 14245 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 1,144,379 to 1,146,733 14245 mRNA_5878: 14246 - KOG4210 Nuclear localization sequence binding protein, at 1,146,916 to 1,148,820 14246
Group Condition mRNA_5874 mRNA_5875 mRNA_5876 mRNA_5877 mRNA_5878
14242 14243 14244 14245 14246
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 +0.2 N.D. -3.0 +0.2
growth on oleic acid YNB Oleic Acid +0.5 +0.2 N.D. -2.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 N.D. -0.4 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid +1.3 +0.4 N.D. -2.7 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.6 +0.2 N.D. -0.0 -1.3
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 N.D. -0.3 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.1 N.D. -0.1 -0.8
growth on oleic acid YNB Glucose +0.4 +0.2 N.D. -0.1 -1.0
auxotrophy Dropout Complete +0.3 -0.0 N.D. -0.2 -0.5
auxotrophy YNB Glucose +0.5 +0.0 N.D. -0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 N.D. -0.0 +0.3
growth on ypd YPD +0.1 -0.3 N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.7 +0.1 N.D. -0.2 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 N.D. -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.0 N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.0 N.D. -0.1 +0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2 N.D. -0.1 +0.8
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.0 N.D. +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.3 N.D. -0.2 +0.6
growth on ricinoleic acid YNB Glucose +0.7 +0.0 N.D. +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 N.D. -0.1 +0.9
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