Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14243 and 14244 are separated by 1042 nucleotides14244 and 14245 are separated by 345 nucleotides14245 and 14246 are separated by 182 nucleotides14246 and 14247 are separated by 341 nucleotides mRNA_5875: 14243 - Hypothetical Protein, at 1,139,653 to 1,140,264 14243 mRNA_5876: 14244 - K14537 NUG2, GNL2 nuclear GTP-binding protein, at 1,141,307 to 1,144,033 14244 mRNA_5877: 14245 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 1,144,379 to 1,146,733 14245 mRNA_5878: 14246 - KOG4210 Nuclear localization sequence binding protein, at 1,146,916 to 1,148,820 14246 mRNA_5879: 14247 - KOG2624 Triglyceride lipase-cholesterol esterase, at 1,149,162 to 1,152,280 14247
Group Condition mRNA_5875 mRNA_5876 mRNA_5877 mRNA_5878 mRNA_5879
14243 14244 14245 14246 14247
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. -3.0 +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -2.7 +0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.2 N.D. -2.2 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.4 -0.7 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.0 -1.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -0.1 -0.8 -0.1
auxotrophy YNB Glucose +0.0 N.D. -0.2 -0.6 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.3 -0.6 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.2 -0.5 -0.2
growth on oleic acid YNB Glucose +0.2 N.D. -0.1 -1.0 +0.1
auxotrophy Dropout Complete -0.0 N.D. -0.2 -0.5 -0.0
growth on ypd YPD -0.3 N.D. +0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.2 +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.1 +0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. +0.0 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. -0.2 +0.6 +0.2
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.1 +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.0 +0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.1 +0.9 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.1 +0.8 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. -0.1 +0.8 +0.5
remove
mRNA_5875
plot		 remove
mRNA_5876
plot		 remove
mRNA_5877		 remove
mRNA_5878
plot		 remove
mRNA_5879
plot