Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14244 and 14245 are separated by 345 nucleotides14245 and 14246 are separated by 182 nucleotides14246 and 14247 are separated by 341 nucleotides14247 and 14248 are separated by 275 nucleotides mRNA_5876: 14244 - K14537 NUG2, GNL2 nuclear GTP-binding protein, at 1,141,307 to 1,144,033 14244 mRNA_5877: 14245 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 1,144,379 to 1,146,733 14245 mRNA_5878: 14246 - KOG4210 Nuclear localization sequence binding protein, at 1,146,916 to 1,148,820 14246 mRNA_5879: 14247 - KOG2624 Triglyceride lipase-cholesterol esterase, at 1,149,162 to 1,152,280 14247 mRNA_5880: 14248 - HMMPfam-Transglycosylase SLT domain-PF01464,SUPERFAMILY--SSF53955, at 1,152,556 to 1,154,002 14248
Group Condition mRNA_5876 mRNA_5877 mRNA_5878 mRNA_5879 mRNA_5880
14244 14245 14246 14247 14248
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -3.0 +0.2 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -2.7 +0.2 +0.1 -0.1
growth on oleic acid YNB Oleic Acid N.D. -2.2 +0.4 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 -0.7 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 -1.3 +0.1 +0.0
auxotrophy YNB Glucose N.D. -0.2 -0.6 -0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 -0.6 -0.0 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.5 -0.2 -0.1
growth on oleic acid YNB Glucose N.D. -0.1 -1.0 +0.1 +0.1
auxotrophy Dropout Complete N.D. -0.2 -0.5 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.8 -0.1 +0.4
growth on ypd YPD N.D. +0.1 +0.1 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.3 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +0.6 +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.3 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.9 -0.4 +0.0
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.1 +0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.3 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.8 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 +0.8 +0.5 +0.3
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