Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14260 and 14261 are separated by 140 nucleotides14261 and 14262 are separated by 406 nucleotides14262 and 14263 are separated by 255 nucleotides14263 and 14264 are separated by 201 nucleotides mRNA_5892: 14260 - Hypothetical Protein, at 1,185,349 to 1,185,740 14260 mRNA_5893: 14261 - KOG1748 Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit, at 1,185,881 to 1,186,514 14261 mRNA_5894: 14262 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1,186,921 to 1,189,596 14262 mRNA_5895: 14263 - K17255 GDI1_2 Rab GDP dissociation inhibitor, at 1,189,852 to 1,191,772 14263 mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1,191,974 to 1,192,832 14264
Group Condition mRNA_5892 mRNA_5893 mRNA_5894 mRNA_5895 mRNA_5896
14260 14261 14262 14263 14264
growth on ypd YPD -0.4 N.D. -0.2 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. +0.0 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.1 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. -0.3 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.2 N.D. -0.1
growth on oleic acid YNB Glucose +0.0 N.D. -0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.2 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.4 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.1 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -0.0 N.D. -0.6
auxotrophy YNB Glucose -0.0 N.D. -0.5 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.2 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.1 N.D. -0.3
growth on oleic acid YNB Oleic Acid +0.3 N.D. +0.1 N.D. -0.7
auxotrophy Dropout Complete -0.3 N.D. -0.1 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 N.D. -0.3 N.D. -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.1 N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.0 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. +0.3 N.D. -0.6
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