Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14262 and 14263 are separated by 255 nucleotides14263 and 14264 are separated by 201 nucleotides14264 and 14265 are separated by 104 nucleotides14265 and 14266 are separated by 1115 nucleotides mRNA_5894: 14262 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1,186,921 to 1,189,596 14262 mRNA_5895: 14263 - K17255 GDI1_2 Rab GDP dissociation inhibitor, at 1,189,852 to 1,191,772 14263 mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1,191,974 to 1,192,832 14264 mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1,192,937 to 1,193,713 14265 mRNA_5898: 14266 - Hypothetical Protein, at 1,194,829 to 1,196,243 14266
Group Condition mRNA_5894 mRNA_5895 mRNA_5896 mRNA_5897 mRNA_5898
14262 14263 14264 14265 14266
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. -0.3 -0.1 -2.9
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.7 -0.0 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -0.6 -0.8 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. -0.6 +0.5 -1.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.1 -0.5 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.6 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.3 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.5 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. -0.1 -0.3 +0.1
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.3 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.0 -0.2 -0.1
growth on oleic acid YNB Glucose -0.1 N.D. -0.5 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.3 +0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.2 +0.0 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.3 +0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.3 +0.1 +0.1
growth on ypd YPD -0.2 N.D. -0.4 +0.3 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.1 -0.1 +0.5
auxotrophy Dropout Complete -0.1 N.D. +0.1 -0.4 +1.2
auxotrophy YNB Glucose -0.5 N.D. +0.2 +0.0 +1.3
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.3 +0.5 +0.9
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