Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14262 and 14263 are separated by 255 nucleotides
14263 and 14264 are separated by 201 nucleotides
14264 and 14265 are separated by 104 nucleotides
14265 and 14266 are separated by 1115 nucleotides
mRNA_5894: 14262 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1,186,921 to 1,189,596
14262
mRNA_5895: 14263 - K17255 GDI1_2 Rab GDP dissociation inhibitor, at 1,189,852 to 1,191,772
14263
mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1,191,974 to 1,192,832
14264
mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1,192,937 to 1,193,713
14265
mRNA_5898: 14266 - Hypothetical Protein, at 1,194,829 to 1,196,243
14266
Group
Condition
mRNA
_5894
mRNA
_5895
mRNA
_5896
mRNA
_5897
mRNA
_5898
14262
14263
14264
14265
14266
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
N.D.
-0.3
-0.1
-2.9
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
-0.7
-0.0
-1.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
N.D.
-0.6
-0.8
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.6
+0.5
-1.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
-0.1
-0.5
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
N.D.
-0.6
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
-0.3
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
-0.5
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
N.D.
-0.1
-0.3
+0.1
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
-0.3
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
-0.0
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
N.D.
-0.5
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
-0.3
+0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
+0.2
+0.0
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
-0.3
+0.4
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
-0.3
+0.1
+0.1
growth on ypd
YPD
-0.2
N.D.
-0.4
+0.3
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.1
-0.1
+0.5
auxotrophy
Dropout Complete
-0.1
N.D.
+0.1
-0.4
+1.2
auxotrophy
YNB Glucose
-0.5
N.D.
+0.2
+0.0
+1.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
N.D.
-0.3
+0.5
+0.9
remove
mRNA_5894
plot
remove
mRNA_5895
plot
remove
mRNA_5896
remove
mRNA_5897
plot
remove
mRNA_5898
plot