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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14264 and 14265 are separated by 104 nucleotides
14265 and 14266 are separated by 1115 nucleotides
14266 and 14267 are separated by 266 nucleotides
14267 and 14268 are separated by 2785 nucleotides
mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1,191,974 to 1,192,832
14264
mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1,192,937 to 1,193,713
14265
mRNA_5898: 14266 - Hypothetical Protein, at 1,194,829 to 1,196,243
14266
mRNA_5899: 14267 - K00038 E1.1.1.53 3alpha(or 20beta)-hydroxysteroid dehydrogenase, at 1,196,510 to 1,197,611
14267
mRNA_5900: 14268 - KOG4778 Mitochondrial ribosomal protein L28, at 1,200,397 to 1,201,096
14268
Group
Condition
mRNA
_5896
mRNA
_5897
mRNA
_5898
mRNA
_5899
mRNA
_5900
14264
14265
14266
14267
14268
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
-2.9
+0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+0.5
-1.6
-0.4
N.D.
growth on oleic acid
YNB Oleic Acid
-0.7
-0.0
-1.3
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.8
-0.1
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.2
-0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.5
-0.3
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.3
-0.1
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.3
+0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.0
-0.3
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.2
-0.1
-0.3
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
-0.1
-0.0
N.D.
growth on oleic acid
YNB Glucose
-0.5
-0.0
+0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.3
+0.1
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
+0.1
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.0
-0.6
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.4
-0.3
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
+0.5
-0.1
N.D.
auxotrophy
Dropout Complete
+0.1
-0.4
+1.2
-0.2
N.D.
growth on ypd
YPD
-0.4
+0.3
+0.5
+0.5
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.5
+0.9
-0.1
N.D.
auxotrophy
YNB Glucose
+0.2
+0.0
+1.3
-0.1
N.D.
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