Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14267 and 14268 are separated by 2785 nucleotides14268 and 14269 are separated by 168 nucleotides14269 and 14270 are separated by 417 nucleotides14270 and 14271 are separated by 568 nucleotides mRNA_5899: 14267 - K00038 E1.1.1.53 3alpha(or 20beta)-hydroxysteroid dehydrogenase, at 1,196,510 to 1,197,611 14267 mRNA_5900: 14268 - KOG4778 Mitochondrial ribosomal protein L28, at 1,200,397 to 1,201,096 14268 mRNA_5901: 14269 - K07204 RAPTOR regulatory associated protein of mTOR, at 1,201,265 to 1,206,244 14269 mRNA_5902: 14270 - K08336 ATG12 ubiquitin-like protein ATG12, at 1,206,662 to 1,207,258 14270 mRNA_5903: 14271 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 1,207,827 to 1,210,876 14271
Group Condition mRNA_5899 mRNA_5900 mRNA_5901 mRNA_5902 mRNA_5903
14267 14268 14269 14270 14271
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. -3.9 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. N.D. -2.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. N.D. -1.5 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. -1.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. N.D. -0.8 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. N.D. -0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. N.D. -0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. N.D. -0.2 -0.0
growth on oleic acid YNB Glucose -0.0 N.D. N.D. -0.3 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. N.D. -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 N.D. N.D. -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. N.D. -0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. -0.2 +0.1
growth on ypd YPD +0.5 N.D. N.D. -0.5 -0.0
auxotrophy Dropout Complete -0.2 N.D. N.D. +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. N.D. -0.0 +0.1
auxotrophy YNB Glucose -0.1 N.D. N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. N.D. +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.0 N.D. N.D. +0.3 +0.2
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