Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14271 and 14272 are separated by 234 nucleotides14272 and 14273 are separated by 202 nucleotides14273 and 14274 are separated by 345 nucleotides14274 and 14275 are separated by 436 nucleotides mRNA_5903: 14271 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 1,207,827 to 1,210,876 14271 mRNA_5904: 14272 - KOG4234 TPR repeat-containing protein, at 1,211,111 to 1,212,389 14272 mRNA_5905: 14273 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 1,212,592 to 1,214,577 14273 mRNA_5906: 14274 - KOG2568 Predicted membrane protein, at 1,214,923 to 1,217,024 14274 mRNA_5907: 14275 - K02726 PSMA2 20S proteasome subunit alpha 2, at 1,217,461 to 1,218,756 14275
Group Condition mRNA_5903 mRNA_5904 mRNA_5905 mRNA_5906 mRNA_5907
14271 14272 14273 14274 14275
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 -0.4 -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 -0.4 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 +0.1 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.1 -0.3 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.1 -0.4 -0.1 N.D.
growth on ypd YPD -0.0 -0.1 -0.3 +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.2 +0.0 -0.0 N.D.
auxotrophy Dropout Complete -0.0 +0.2 -0.3 +0.2 N.D.
growth on oleic acid YNB Glucose +0.0 -0.1 -0.0 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.3 -0.0 -0.1 N.D.
auxotrophy YNB Glucose +0.1 +0.0 -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 +0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 +0.1 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 +0.3 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.3 +0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.2 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.3 +0.4 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.2 -0.1 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.5 +0.3 -0.1 N.D.
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