Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14274 and 14275 are separated by 436 nucleotides14275 and 14276 are separated by 180 nucleotides14276 and 14277 are separated by 386 nucleotides14277 and 14278 are separated by 695 nucleotides mRNA_5906: 14274 - KOG2568 Predicted membrane protein, at 1,214,923 to 1,217,024 14274 mRNA_5907: 14275 - K02726 PSMA2 20S proteasome subunit alpha 2, at 1,217,461 to 1,218,756 14275 mRNA_5908: 14276 - Hypothetical Protein, at 1,218,937 to 1,220,289 14276 mRNA_5909: 14277 - K00077 panE, apbA 2-dehydropantoate 2-reductase, at 1,220,676 to 1,222,238 14277 mRNA_5910: 14278 - K11094 SNRPB2 U2 small nuclear ribonucleoprotein B'', at 1,222,934 to 1,224,150 14278
Group Condition mRNA_5906 mRNA_5907 mRNA_5908 mRNA_5909 mRNA_5910
14274 14275 14276 14277 14278
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.0 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.0 N.D. -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. -0.0 N.D. N.D.
growth on oleic acid YNB Glucose +0.2 N.D. -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.1 N.D. N.D.
auxotrophy Dropout Complete +0.2 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.0 N.D. N.D.
auxotrophy YNB Glucose +0.2 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. -0.1 N.D. N.D.
growth on ypd YPD +0.3 N.D. +0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. -0.0 N.D. N.D.
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