Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14287 and 14288 are separated by 546 nucleotides
14288 and 14289 are separated by 327 nucleotides
14289 and 14290 are separated by 361 nucleotides
14290 and 14291 are separated by 228 nucleotides
mRNA_5919: 14287 - KOG1836 Extracellular matrix glycoprotein Laminin subunits alpha and gamma, at 1,243,346 to 1,244,488
14287
mRNA_5920: 14288 - K03022 RPC8, POLR3H DNA-directed RNA polymerase III subunit RPC8, at 1,245,035 to 1,246,181
14288
mRNA_5921: 14289 - K14789 NOP6 nucleolar protein 6, at 1,246,509 to 1,247,671
14289
mRNA_5922: 14290 - KOG2615 Permease of the major facilitator superfamily, at 1,248,033 to 1,250,292
14290
mRNA_5923: 14291 - Hypothetical Protein, at 1,250,521 to 1,252,359
14291
Group
Condition
mRNA
_5919
mRNA
_5920
mRNA
_5921
mRNA
_5922
mRNA
_5923
14287
14288
14289
14290
14291
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
N.D.
-1.5
-0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
-1.0
-0.2
-0.3
auxotrophy
YNB Glucose
-0.0
N.D.
-0.9
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
-0.5
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
-0.6
-0.3
-0.1
auxotrophy
Dropout Complete
-0.1
N.D.
-0.6
-0.4
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
N.D.
-0.5
+0.0
-0.1
growth on ricinoleic acid
YNB Glucose
-0.4
N.D.
-0.5
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
-0.5
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
+0.1
-0.5
-0.3
growth on oleic acid
YNB Glucose
-0.1
N.D.
-0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
N.D.
-0.3
-0.2
-0.2
growth on ypd
YPD
-0.0
N.D.
-0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
N.D.
+0.2
-0.4
-0.0
growth on oleic acid
YNB Oleic Acid
-0.4
N.D.
+0.4
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
-0.2
+0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
N.D.
+0.3
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
-0.1
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
+0.5
-0.4
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
-0.1
+0.3
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
N.D.
+1.4
-0.1
+0.3
remove
mRNA_5919
plot
remove
mRNA_5920
plot
remove
mRNA_5921
remove
mRNA_5922
plot
remove
mRNA_5923
plot