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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14290 and 14291 are separated by 228 nucleotides
14291 and 14292 are separated by 407 nucleotides
14292 and 14293 are separated by 485 nucleotides
14293 and 14294 are separated by 585 nucleotides
mRNA_5922: 14290 - KOG2615 Permease of the major facilitator superfamily, at 1,248,033 to 1,250,292
14290
mRNA_5923: 14291 - Hypothetical Protein, at 1,250,521 to 1,252,359
14291
mRNA_5924: 14292 - Hypothetical Protein, at 1,252,767 to 1,253,649
14292
mRNA_5925: 14293 - Hypothetical Protein, at 1,254,135 to 1,254,530
14293
mRNA_5926: 14294 - K02989 RP-S5e, RPS5 small subunit ribosomal protein S5e, at 1,255,116 to 1,256,595
14294
Group
Condition
mRNA
_5922
mRNA
_5923
mRNA
_5924
mRNA
_5925
mRNA
_5926
14290
14291
14292
14293
14294
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.3
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.2
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.2
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose
-0.4
-0.2
N.D.
N.D.
N.D.
auxotrophy
Dropout Complete
-0.4
-0.2
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.1
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.3
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.0
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.1
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
N.D.
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
N.D.
N.D.
N.D.
growth on oleic acid
YNB Glucose
-0.0
-0.2
N.D.
N.D.
N.D.
growth on ypd
YPD
-0.1
-0.2
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.1
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.3
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
-0.0
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.0
N.D.
N.D.
N.D.
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