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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14292 and 14293 are separated by 485 nucleotides
14293 and 14294 are separated by 585 nucleotides
14294 and 14295 are separated by 124 nucleotides
14295 and 14296 are separated by 645 nucleotides
mRNA_5924: 14292 - Hypothetical Protein, at 1,252,767 to 1,253,649
14292
mRNA_5925: 14293 - Hypothetical Protein, at 1,254,135 to 1,254,530
14293
mRNA_5926: 14294 - K02989 RP-S5e, RPS5 small subunit ribosomal protein S5e, at 1,255,116 to 1,256,595
14294
mRNA_5927: 14295 - K02979 RP-S28e, RPS28 small subunit ribosomal protein S28e, at 1,256,720 to 1,257,399
14295
mRNA_5928: 14296 - KOG3472 Predicted small membrane protein, at 1,258,045 to 1,258,837
14296
Group
Condition
mRNA
_5924
mRNA
_5925
mRNA
_5926
mRNA
_5927
mRNA
_5928
14292
14293
14294
14295
14296
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
N.D.
-2.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
N.D.
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
N.D.
-0.5
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
N.D.
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
N.D.
-0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
N.D.
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
N.D.
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
N.D.
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
N.D.
-0.2
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
N.D.
+0.0
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
N.D.
+0.0
growth on ypd
YPD
N.D.
N.D.
N.D.
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
N.D.
+0.5
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