Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14295 and 14296 are separated by 645 nucleotides
14296 and 14297 are separated by 266 nucleotides
14297 and 14298 are separated by 1587 nucleotides
14298 and 14299 are separated by 146 nucleotides
mRNA_5927: 14295 - K02979 RP-S28e, RPS28 small subunit ribosomal protein S28e, at 1,256,720 to 1,257,399
14295
mRNA_5928: 14296 - KOG3472 Predicted small membrane protein, at 1,258,045 to 1,258,837
14296
mRNA_5929: 14297 - Hypothetical Protein, at 1,259,104 to 1,259,543
14297
mRNA_5930: 14298 - Hypothetical Protein, at 1,261,131 to 1,261,763
14298
mRNA_5931: 14299 - SUPERFAMILY--SSF51695, at 1,261,910 to 1,263,239
14299
Group
Condition
mRNA
_5927
mRNA
_5928
mRNA
_5929
mRNA
_5930
mRNA
_5931
14295
14296
14297
14298
14299
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-2.3
-1.8
-1.3
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.5
-0.5
-0.6
-0.2
growth on ypd
YPD
N.D.
+0.0
-0.9
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.3
-0.2
-0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.3
-0.1
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
-0.2
-0.5
+0.2
auxotrophy
Dropout Complete
N.D.
-0.5
-0.3
+0.3
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
-0.3
+0.6
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
+0.5
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
-0.2
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.3
+0.0
+0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.3
-0.7
+0.4
+0.6
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
-0.4
+0.0
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.5
-0.3
+0.5
+0.2
growth on oleic acid
YNB Glucose
N.D.
-0.1
+0.3
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.7
-0.0
+0.5
+0.3
auxotrophy
YNB Glucose
N.D.
+0.0
+0.5
+0.7
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.4
+0.2
+1.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.5
+0.5
+1.3
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.5
+0.6
+1.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
+1.4
+1.3
+0.1
remove
mRNA_5927
plot
remove
mRNA_5928
plot
remove
mRNA_5929
remove
mRNA_5930
plot
remove
mRNA_5931
plot