Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14303 and 14304 are separated by 450 nucleotides14304 and 14305 are separated by 395 nucleotides14305 and 14306 are separated by 974 nucleotides14306 and 14307 are separated by 101 nucleotides mRNA_5935: 14303 - HMMPfam-Homeobox KN domain-PF05920,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SUPERFAMILY--SSF46689, at 1,270,620 to 1,271,852 14303 mRNA_5936: 14304 - HMMPfam-Homeobox domain-PF00046,HMMPfam-Predicted membrane protein (DUF2231)-PF09990,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689, at 1,272,303 to 1,276,279 14304 mRNA_5937: 14305 - Hypothetical Protein, at 1,276,675 to 1,277,757 14305 mRNA_5938: 14306 - Hypothetical Protein, at 1,278,732 to 1,279,189 14306 mRNA_5939: 14307 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 1,279,291 to 1,281,884 14307
Group Condition mRNA_5935 mRNA_5936 mRNA_5937 mRNA_5938 mRNA_5939
14303 14304 14305 14306 14307
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.2 +0.2 -0.7 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 -0.2 -0.6 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 -0.4 +0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.1 +0.2 -0.0 -0.0
auxotrophy YNB Glucose -0.4 +0.1 -0.1 +0.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.0 -0.2 +0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.4 +0.0 +0.1 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 +0.5 -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 +0.0 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 -0.1 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.7 -0.0 -0.4 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.3 +0.4 -0.6 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.1 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 +0.6 -0.2 -0.0
growth on oleic acid YNB Glucose -0.3 +0.0 +0.1 +0.5 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.2 +0.2 -0.1 +0.0
auxotrophy Dropout Complete +0.5 +0.1 +0.0 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.2 +0.0 +0.7 -0.0
growth on ypd YPD +1.2 -0.1 -0.2 +0.2 +0.2
growth on ricinoleic acid YNB Glucose +0.9 +0.3 -0.2 +0.6 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 +0.2 +0.4 +0.5 +0.2
remove
mRNA_5935
plot
remove
mRNA_5936
plot
remove
mRNA_5937
remove
mRNA_5938
plot
remove
mRNA_5939
plot