Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14304 and 14305 are separated by 395 nucleotides14305 and 14306 are separated by 974 nucleotides14306 and 14307 are separated by 101 nucleotides14307 and 14308 are separated by 406 nucleotides mRNA_5936: 14304 - HMMPfam-Homeobox domain-PF00046,HMMPfam-Predicted membrane protein (DUF2231)-PF09990,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689, at 1,272,303 to 1,276,279 14304 mRNA_5937: 14305 - Hypothetical Protein, at 1,276,675 to 1,277,757 14305 mRNA_5938: 14306 - Hypothetical Protein, at 1,278,732 to 1,279,189 14306 mRNA_5939: 14307 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 1,279,291 to 1,281,884 14307 mRNA_5940: 14308 - KOG3975 Uncharacterized conserved protein, at 1,282,291 to 1,283,820 14308
Group Condition mRNA_5936 mRNA_5937 mRNA_5938 mRNA_5939 mRNA_5940
14304 14305 14306 14307 14308
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 +0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 -0.6 +0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.4 +0.3 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.2 -0.7 +0.4 -0.2
auxotrophy Dropout Complete +0.1 +0.0 +0.2 -0.1 -0.1
growth on ypd YPD -0.1 -0.2 +0.2 +0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 -0.0 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 -0.0 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.4 -0.6 +0.2 +0.1
auxotrophy YNB Glucose +0.1 -0.1 +0.3 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.6 -0.2 -0.0 -0.1
growth on oleic acid YNB Oleic Acid +0.0 +0.1 +0.4 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.5 -0.4 +0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.2 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.2 +0.2 -0.1 +0.4
growth on oleic acid YNB Glucose +0.0 +0.1 +0.5 +0.3 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.0 +0.2 +0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 -0.1 +0.0 +0.4
growth on ricinoleic acid YNB Glucose +0.3 -0.2 +0.6 +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.4 +0.5 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.0 +0.7 -0.0 +0.5
remove
mRNA_5936
plot
remove
mRNA_5937
plot
remove
mRNA_5938
remove
mRNA_5939
plot
remove
mRNA_5940
plot