Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14308 and 14309 are separated by 305 nucleotides14309 and 14310 are separated by 488 nucleotides14310 and 14311 are separated by 301 nucleotides14311 and 14312 are separated by 187 nucleotides mRNA_5940: 14308 - KOG3975 Uncharacterized conserved protein, at 1,282,291 to 1,283,820 14308 mRNA_5941: 14309 - K14676 NTE, NRE lysophospholipid hydrolase, at 1,284,126 to 1,289,660 14309 mRNA_5942: 14310 - HMMPfam-BUD22-PF09073, at 1,290,149 to 1,292,064 14310 mRNA_5943: 14311 - Hypothetical Protein, at 1,292,366 to 1,293,493 14311 mRNA_5944: 14312 - Hypothetical Protein, at 1,293,681 to 1,295,115 14312
Group Condition mRNA_5940 mRNA_5941 mRNA_5942 mRNA_5943 mRNA_5944
14308 14309 14310 14311 14312
auxotrophy Dropout Complete -0.1 -0.2 N.D. -0.4 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 N.D. -0.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.6 N.D. -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 N.D. -0.2 -0.1
growth on oleic acid YNB Glucose -0.4 +0.3 N.D. -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.3 N.D. +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 N.D. +0.0 -0.2
growth on ypd YPD +0.3 -0.4 N.D. +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 N.D. +0.1 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.5 N.D. +0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.2 N.D. +0.1 +0.1
auxotrophy YNB Glucose +0.0 -0.1 N.D. +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 N.D. +0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.4 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.0 N.D. +0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 N.D. +0.1 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.0 N.D. -0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 N.D. +0.2 +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 N.D. +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 N.D. +0.4 +0.3
remove
mRNA_5940
plot
remove
mRNA_5941
plot
remove
mRNA_5942
remove
mRNA_5943
plot
remove
mRNA_5944
plot