Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14314 and 14315 are separated by 139 nucleotides14315 and 14316 are separated by 476 nucleotides14316 and 14317 are separated by 869 nucleotides14317 and 14318 are separated by 1640 nucleotides mRNA_5946: 14314 - Hypothetical Protein, at 1,296,750 to 1,297,889 14314 mRNA_5947: 14315 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 1,298,029 to 1,303,055 14315 mRNA_5948: 14316 - HMMPfam-Zinc finger C-x8-C-x5-C-x3-H type-PF14608,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356, at 1,303,532 to 1,306,602 14316 mRNA_5949: 14317 - K01046 E3.1.1.3 triacylglycerol lipase, at 1,307,472 to 1,308,620 14317 mRNA_5950: 14318 - KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain, at 1,310,261 to 1,312,291 14318
Group Condition mRNA_5946 mRNA_5947 mRNA_5948 mRNA_5949 mRNA_5950
14314 14315 14316 14317 14318
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.2 -0.9 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.8 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.4 -0.4 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -1.0 +0.2 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.4 -0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -0.4 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.9 +0.1 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.1 -0.3 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.6 -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.3 -0.5 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 -0.2 N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.2 -0.3 +0.1 N.D. -0.0
auxotrophy YNB Glucose +0.0 +0.2 -0.3 N.D. -0.3
auxotrophy Dropout Complete -0.0 +0.2 -0.1 N.D. -0.5
growth on oleic acid YNB Glucose +0.0 -0.7 +0.4 N.D. +0.0
growth on ricinoleic acid YNB Glucose +0.2 -0.3 +0.1 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 -0.2 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 +0.2 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 +0.5 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.8 +0.7 N.D. +0.4
growth on ypd YPD +0.1 +0.8 +0.7 N.D. +0.0
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