Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14319 and 14320 are separated by 351 nucleotides14320 and 14321 are separated by 270 nucleotides14321 and 14322 are separated by 124 nucleotides14322 and 14323 are separated by 986 nucleotides mRNA_5951: 14319 - HMMPfam-Peptidase of plants and bacteria-PF04450, at 1,312,489 to 1,313,415 14319 mRNA_5952: 14320 - K15198 BDP1, TFC5 transcription factor TFIIIB component B'', at 1,313,767 to 1,316,568 14320 mRNA_5953: 14321 - KOG2084 Predicted histone tail methylase containing SET domain, at 1,316,839 to 1,317,817 14321 mRNA_5954: 14322 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665, at 1,317,942 to 1,318,810 14322 mRNA_5955: 14323 - K11654 SMARCA5, SNF2H, ISWI SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, at 1,319,797 to 1,323,881 14323
Group Condition mRNA_5951 mRNA_5952 mRNA_5953 mRNA_5954 mRNA_5955
14319 14320 14321 14322 14323
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. -0.3 -0.3 N.D.
growth on ypd YPD -0.3 N.D. -0.2 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.0 -0.6 N.D.
auxotrophy YNB Glucose +0.1 N.D. -0.1 -0.4 N.D.
auxotrophy Dropout Complete +0.0 N.D. -0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.2 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.2 +0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.0 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. -0.3 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. +0.1 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. +0.2 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.3 N.D. +0.1 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.0 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +0.0 +0.1 N.D.
growth on oleic acid YNB Glucose +0.4 N.D. +0.0 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. +0.2 +0.3 N.D.
remove
mRNA_5951
plot		 remove
mRNA_5952
plot		 remove
mRNA_5953		 remove
mRNA_5954
plot		 remove
mRNA_5955
plot