Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14327 and 14328 are separated by 311 nucleotides14328 and 14329 are separated by 223 nucleotides14329 and 14330 are separated by 657 nucleotides14330 and 14331 are separated by 443 nucleotides mRNA_5959: 14327 - HMMPfam-Domain of unknown function (DUF1793)-PF08760, at 1,334,549 to 1,337,487 14327 mRNA_5960: 14328 - Hypothetical Protein, at 1,337,799 to 1,338,235 14328 mRNA_5961: 14329 - HMMPfam-F-box-like-PF12937, at 1,338,459 to 1,339,688 14329 mRNA_5962: 14330 - Hypothetical Protein, at 1,340,346 to 1,341,615 14330 mRNA_5963: 14331 - Interpro F-box-like, at 1,342,059 to 1,343,538 14331
Group Condition mRNA_5959 mRNA_5960 mRNA_5961 mRNA_5962 mRNA_5963
14327 14328 14329 14330 14331
growth on oleic acid YNB Oleic Acid +0.3 -0.5 -0.0 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -0.2 -0.0 -0.0
growth on oleic acid YNB Glucose -0.0 -0.0 -0.0 +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.2 -0.1 -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.0 +0.2 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 +0.4 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 +0.2 +0.2 -0.3
auxotrophy YNB Glucose -0.3 -0.2 +0.1 +0.4 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.7 +0.7 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 +0.1 +0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.4 -0.1 -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.3 -0.1 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.0 +0.2 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 +0.2 +0.4 -0.2
auxotrophy Dropout Complete -0.2 +0.1 +0.1 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.5 +0.2 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.0 +0.2 +0.6 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.5 -0.0 +0.1 +0.3
growth on ypd YPD +0.3 +0.1 +0.0 +0.4 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.3 +0.3 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.7 +0.1 +0.0 -0.1
remove
mRNA_5959
plot
remove
mRNA_5960
plot
remove
mRNA_5961
remove
mRNA_5962
plot
remove
mRNA_5963
plot