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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14330 and 14331 are separated by 443 nucleotides
14331 and 14332 are separated by 228 nucleotides
14332 and 14333 are separated by 77 nucleotides
14333 and 14334 are separated by 432 nucleotides
mRNA_5962: 14330 - Hypothetical Protein, at 1,340,346 to 1,341,615
14330
mRNA_5963: 14331 - Interpro F-box-like, at 1,342,059 to 1,343,538
14331
mRNA_5964: 14332 - Hypothetical Protein, at 1,343,767 to 1,344,081
14332
mRNA_5965: 14333 - Hypothetical Protein, at 1,344,159 to 1,346,250
14333
mRNA_5966: 14334 - KOG1950 Glycosyl transferase, family 8 - glycogenin, at 1,346,683 to 1,347,941
14334
Group
Condition
mRNA
_5962
mRNA
_5963
mRNA
_5964
mRNA
_5965
mRNA
_5966
14330
14331
14332
14333
14334
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.2
-0.1
-1.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.3
-0.6
-0.0
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
+0.0
+0.0
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.1
-0.3
+0.0
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.1
+0.4
-0.1
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
-0.2
+0.1
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.2
+0.6
+0.0
-0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.0
+0.3
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.3
-0.0
+0.3
-0.5
growth on oleic acid
YNB Glucose
+0.3
-0.2
-0.0
+0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.0
+0.3
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.0
-0.3
-0.1
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
-0.1
-0.1
+0.4
auxotrophy
Dropout Complete
+0.3
+0.3
-0.1
+0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.1
+0.2
+0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.2
+0.2
+0.2
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
+0.3
+0.2
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.0
-0.1
+0.2
+0.7
auxotrophy
YNB Glucose
+0.4
+0.2
+0.2
+0.3
-0.1
growth on ricinoleic acid
YNB Glucose
+0.6
+0.1
+0.6
+0.2
-0.3
growth on ypd
YPD
+0.4
-0.0
-0.0
+0.1
+0.9
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