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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14332 and 14333 are separated by 77 nucleotides
14333 and 14334 are separated by 432 nucleotides
14334 and 14335 are separated by 92 nucleotides
14335 and 14336 are separated by 296 nucleotides
mRNA_5964: 14332 - Hypothetical Protein, at 1,343,767 to 1,344,081
14332
mRNA_5965: 14333 - Hypothetical Protein, at 1,344,159 to 1,346,250
14333
mRNA_5966: 14334 - KOG1950 Glycosyl transferase, family 8 - glycogenin, at 1,346,683 to 1,347,941
14334
mRNA_5967: 14335 - Hypothetical Protein, at 1,348,034 to 1,349,199
14335
mRNA_5968: 14336 - Hypothetical Protein, at 1,349,496 to 1,350,670
14336
Group
Condition
mRNA
_5964
mRNA
_5965
mRNA
_5966
mRNA
_5967
mRNA
_5968
14332
14333
14334
14335
14336
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
-1.9
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.0
-0.4
+0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.0
-0.7
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
-0.5
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.0
-0.4
-0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.1
-0.9
-0.2
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.3
-0.5
-0.1
-0.3
auxotrophy
Dropout Complete
-0.1
+0.2
-0.2
-0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
+0.0
-0.8
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.2
-0.4
+0.0
-0.4
auxotrophy
YNB Glucose
+0.2
+0.3
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.0
-0.1
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
+0.6
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.0
+0.2
-0.0
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
+0.4
+0.4
-0.1
growth on ricinoleic acid
YNB Glucose
+0.6
+0.2
-0.3
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.0
-0.1
-0.0
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.3
+0.0
-0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.2
+0.2
-0.1
+0.0
growth on ypd
YPD
-0.0
+0.1
+0.9
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
+0.7
+0.1
+0.2
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