Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14334 and 14335 are separated by 92 nucleotides
14335 and 14336 are separated by 296 nucleotides
14336 and 14337 are separated by 192 nucleotides
14337 and 14338 are separated by 297 nucleotides
mRNA_5966: 14334 - KOG1950 Glycosyl transferase, family 8 - glycogenin, at 1,346,683 to 1,347,941
14334
mRNA_5967: 14335 - Hypothetical Protein, at 1,348,034 to 1,349,199
14335
mRNA_5968: 14336 - Hypothetical Protein, at 1,349,496 to 1,350,670
14336
mRNA_5969: 14337 - Hypothetical Protein, at 1,350,863 to 1,351,981
14337
mRNA_5970: 14338 - Hypothetical Protein, at 1,352,279 to 1,353,458
14338
Group
Condition
mRNA
_5966
mRNA
_5967
mRNA
_5968
mRNA
_5969
mRNA
_5970
14334
14335
14336
14337
14338
ypd buoyancy
40 hrs Low Buoyancy
-0.7
-0.5
-0.0
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-1.9
-0.2
-0.1
+0.0
+0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.2
+0.0
-0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
-0.3
+0.2
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.1
-0.3
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.1
-0.2
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.0
-0.4
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.1
-0.3
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.3
+0.1
-0.1
-0.1
auxotrophy
Dropout Complete
-0.2
-0.3
-0.1
+0.1
-0.0
auxotrophy
YNB Glucose
-0.1
-0.1
-0.2
+0.2
-0.1
growth on oleic acid
YNB Glucose
-0.0
+0.1
+0.1
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
+0.2
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
-0.1
-0.2
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
+0.0
+0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.0
+0.0
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.4
-0.1
-0.1
-0.2
growth on oleic acid
YNB Oleic Acid
+0.6
-0.2
-0.1
+0.0
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.0
+0.3
+0.4
-0.0
growth on ypd
YPD
+0.9
-0.0
-0.1
+0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.7
+0.1
+0.2
+0.3
-0.2
remove
mRNA_5966
plot
remove
mRNA_5967
plot
remove
mRNA_5968
remove
mRNA_5969
plot
remove
mRNA_5970
plot