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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14336 and 14337 are separated by 192 nucleotides
14337 and 14338 are separated by 297 nucleotides
14338 and 14339 are separated by 185 nucleotides
14339 and 14340 are separated by 266 nucleotides
mRNA_5968: 14336 - Hypothetical Protein, at 1,349,496 to 1,350,670
14336
mRNA_5969: 14337 - Hypothetical Protein, at 1,350,863 to 1,351,981
14337
mRNA_5970: 14338 - Hypothetical Protein, at 1,352,279 to 1,353,458
14338
mRNA_5971: 14339 - Hypothetical Protein, at 1,353,644 to 1,354,802
14339
mRNA_5972: 14340 - K03243 EIF5B translation initiation factor 5B, at 1,355,069 to 1,359,492
14340
Group
Condition
mRNA
_5968
mRNA
_5969
mRNA
_5970
mRNA
_5971
mRNA
_5972
14336
14337
14338
14339
14340
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.1
-0.1
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.1
-0.2
-0.2
N.D.
auxotrophy
Dropout Complete
-0.1
+0.1
-0.0
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.2
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.2
+0.1
-0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.1
-0.1
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.0
-0.1
-0.1
N.D.
auxotrophy
YNB Glucose
-0.2
+0.2
-0.1
-0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.2
+0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.1
-0.1
-0.1
N.D.
growth on oleic acid
YNB Glucose
+0.1
-0.1
-0.2
+0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
+0.1
-0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.0
-0.1
-0.1
N.D.
growth on ypd
YPD
-0.1
+0.0
-0.2
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
+0.0
+0.0
+0.0
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.4
-0.1
-0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
+0.4
-0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.4
-0.0
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
+0.1
+0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.0
+0.8
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.3
-0.2
+0.3
N.D.
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