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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14338 and 14339 are separated by 185 nucleotides
14339 and 14340 are separated by 266 nucleotides
14340 and 14341 are separated by 131 nucleotides
14341 and 14342 overlap by 4 nucleotides
mRNA_5970: 14338 - Hypothetical Protein, at 1,352,279 to 1,353,458
14338
mRNA_5971: 14339 - Hypothetical Protein, at 1,353,644 to 1,354,802
14339
mRNA_5972: 14340 - K03243 EIF5B translation initiation factor 5B, at 1,355,069 to 1,359,492
14340
mRNA_5973: 14341 - Hypothetical Protein, at 1,359,624 to 1,360,109
14341
mRNA_5974: 14342 - SUPERFAMILY--SSF54909, at 1,360,106 to 1,360,539
14342
Group
Condition
mRNA
_5970
mRNA
_5971
mRNA
_5972
mRNA
_5973
mRNA
_5974
14338
14339
14340
14341
14342
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
N.D.
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.3
N.D.
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.5
N.D.
+0.1
+0.0
auxotrophy
YNB Glucose
-0.1
-0.3
N.D.
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.2
N.D.
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.2
+0.0
N.D.
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
N.D.
-0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.4
N.D.
+0.1
+0.2
auxotrophy
Dropout Complete
-0.0
-0.5
N.D.
+0.4
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.0
N.D.
+0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.1
N.D.
+0.7
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
N.D.
+0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.0
N.D.
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
+0.0
+0.0
N.D.
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
N.D.
+0.5
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
N.D.
+0.7
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
N.D.
+0.3
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.3
N.D.
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
N.D.
+0.6
+0.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.8
-0.3
N.D.
+0.1
+0.4
growth on ypd
YPD
-0.2
+0.3
N.D.
+0.6
+0.3
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