Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14341 and 14342 overlap by 4 nucleotides
14342 and 14343 are separated by 492 nucleotides
14343 and 14344 are separated by 340 nucleotides
14344 and 14345 are separated by 392 nucleotides
mRNA_5973: 14341 - Hypothetical Protein, at 1,359,624 to 1,360,109
14341
mRNA_5974: 14342 - SUPERFAMILY--SSF54909, at 1,360,106 to 1,360,539
14342
mRNA_5975: 14343 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1,361,032 to 1,363,169
14343
mRNA_5976: 14344 - SUPERFAMILY--SSF52047, at 1,363,510 to 1,364,859
14344
mRNA_5977: 14345 - HMMPfam-F-box-like-PF12937, at 1,365,252 to 1,367,121
14345
Group
Condition
mRNA
_5973
mRNA
_5974
mRNA
_5975
mRNA
_5976
mRNA
_5977
14341
14342
14343
14344
14345
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
+0.1
-0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.4
-0.3
-0.8
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
+0.1
+0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.2
-0.0
-0.4
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.2
+0.1
+0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
+0.0
+0.0
-0.5
+0.0
auxotrophy
YNB Glucose
+0.0
-0.1
+0.3
-0.4
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.2
+0.1
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
+0.6
-0.2
-0.6
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
-0.2
-0.0
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.3
+0.1
+0.2
+0.2
growth on oleic acid
YNB Glucose
-0.0
-0.2
+0.4
+0.2
+0.4
growth on oleic acid
YNB Oleic Acid
-0.0
+0.1
+0.2
+0.2
+0.4
growth on ricinoleic acid
YNB Glucose
+0.3
-0.3
+0.3
+0.5
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
+0.3
-0.0
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
-0.6
+0.1
+0.5
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.4
-0.1
+0.1
+0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.2
+0.4
+0.3
+0.4
auxotrophy
Dropout Complete
+0.4
+0.1
+0.6
-0.3
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.0
+0.2
+0.4
+0.2
growth on ypd
YPD
+0.6
+0.3
+0.4
+0.2
+0.3
remove
mRNA_5973
plot
remove
mRNA_5974
plot
remove
mRNA_5975
remove
mRNA_5976
plot
remove
mRNA_5977
plot