Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14342 and 14343 are separated by 492 nucleotides14343 and 14344 are separated by 340 nucleotides14344 and 14345 are separated by 392 nucleotides14345 and 14346 are separated by 724 nucleotides mRNA_5974: 14342 - SUPERFAMILY--SSF54909, at 1,360,106 to 1,360,539 14342 mRNA_5975: 14343 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1,361,032 to 1,363,169 14343 mRNA_5976: 14344 - SUPERFAMILY--SSF52047, at 1,363,510 to 1,364,859 14344 mRNA_5977: 14345 - HMMPfam-F-box-like-PF12937, at 1,365,252 to 1,367,121 14345 mRNA_5978: 14346 - Hypothetical Protein, at 1,367,846 to 1,369,331 14346
Group Condition mRNA_5974 mRNA_5975 mRNA_5976 mRNA_5977 mRNA_5978
14342 14343 14344 14345 14346
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.3 -0.8 +0.0 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.1 -0.1 -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 +0.0 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.2 -0.6 -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.1 -0.4 +0.1
auxotrophy YNB Glucose -0.1 +0.3 -0.4 +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.0 -0.4 -0.4 +1.0
growth on oleic acid YNB Oleic Acid +0.1 +0.2 +0.2 +0.4 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 +0.2 +0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.0 +0.2 -0.1 +0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.0 -0.5 +0.0 +1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 +0.4 +0.2 -0.0
growth on oleic acid YNB Glucose -0.2 +0.4 +0.2 +0.4 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.1 +0.1 +0.4 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.1 +0.5 +0.3 +0.6
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.3 -0.0 +0.5 +0.1
auxotrophy Dropout Complete +0.1 +0.6 -0.3 +0.4 +0.0
growth on ricinoleic acid YNB Glucose -0.3 +0.3 +0.5 +0.2 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.4 +0.3 +0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.0 +0.1 +1.1
growth on ypd YPD +0.3 +0.4 +0.2 +0.3 +0.7
remove
mRNA_5974
plot
remove
mRNA_5975
plot
remove
mRNA_5976
remove
mRNA_5977
plot
remove
mRNA_5978
plot