Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14342 and 14343 are separated by 492 nucleotides
14343 and 14344 are separated by 340 nucleotides
14344 and 14345 are separated by 392 nucleotides
14345 and 14346 are separated by 724 nucleotides
mRNA_5974: 14342 - SUPERFAMILY--SSF54909, at 1,360,106 to 1,360,539
14342
mRNA_5975: 14343 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1,361,032 to 1,363,169
14343
mRNA_5976: 14344 - SUPERFAMILY--SSF52047, at 1,363,510 to 1,364,859
14344
mRNA_5977: 14345 - HMMPfam-F-box-like-PF12937, at 1,365,252 to 1,367,121
14345
mRNA_5978: 14346 - Hypothetical Protein, at 1,367,846 to 1,369,331
14346
Group
Condition
mRNA
_5974
mRNA
_5975
mRNA
_5976
mRNA
_5977
mRNA
_5978
14342
14343
14344
14345
14346
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.3
-0.8
+0.0
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.1
-0.1
-0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.1
+0.0
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
-0.2
-0.6
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.1
-0.4
+0.1
auxotrophy
YNB Glucose
-0.1
+0.3
-0.4
+0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.0
-0.4
-0.4
+1.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
+0.2
+0.4
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.1
+0.2
+0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.0
+0.2
-0.1
+0.7
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.0
-0.5
+0.0
+1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.2
+0.4
+0.2
-0.0
growth on oleic acid
YNB Glucose
-0.2
+0.4
+0.2
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
+0.1
+0.4
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
+0.1
+0.5
+0.3
+0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.3
-0.0
+0.5
+0.1
auxotrophy
Dropout Complete
+0.1
+0.6
-0.3
+0.4
+0.0
growth on ricinoleic acid
YNB Glucose
-0.3
+0.3
+0.5
+0.2
+0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.4
+0.3
+0.4
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.0
+0.1
+1.1
growth on ypd
YPD
+0.3
+0.4
+0.2
+0.3
+0.7
remove
mRNA_5974
plot
remove
mRNA_5975
plot
remove
mRNA_5976
remove
mRNA_5977
plot
remove
mRNA_5978
plot