Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14346 and 14347 are separated by 241 nucleotides14347 and 14348 are separated by 285 nucleotides14348 and 14349 are separated by 584 nucleotides14349 and 14350 are separated by 847 nucleotides mRNA_5978: 14346 - Hypothetical Protein, at 1,367,846 to 1,369,331 14346 mRNA_5979: 14347 - K12832 SF3B5, SF3B10 splicing factor 3B subunit 5, at 1,369,573 to 1,370,035 14347 mRNA_5980: 14348 - K12592 C1D, LRP1 exosome complex protein LRP1, at 1,370,321 to 1,371,409 14348 mRNA_5981: 14349 - Hypothetical Protein, at 1,371,994 to 1,372,598 14349 mRNA_5982: 14350 - KOG0379 Kelch repeat-containing proteins, at 1,373,446 to 1,378,307 14350
Group Condition mRNA_5978 mRNA_5979 mRNA_5980 mRNA_5981 mRNA_5982
14346 14347 14348 14349 14350
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. -2.0 -3.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. -0.2 -0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. -0.4 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.4 +0.0 +0.1
auxotrophy Dropout Complete +0.0 N.D. -0.7 -0.0 +0.2
auxotrophy YNB Glucose -0.2 N.D. -0.6 +0.0 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.1 -0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.4 N.D. +0.3 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.0 +0.3 -0.0
growth on oleic acid YNB Glucose -0.0 N.D. +0.2 -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. -0.2 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. -0.2 +0.3 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.2 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.1 +0.6 +0.3
growth on ypd YPD +0.7 N.D. +0.5 -0.5 +0.2
growth on ricinoleic acid YNB Glucose +0.4 N.D. +0.2 +0.5 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. +0.1 +0.5 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +1.0 N.D. +0.6 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +1.1 N.D. +0.9 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +1.0 N.D. +0.6 +0.0 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 N.D. +0.9 +0.6 +0.4
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