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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14348 and 14349 are separated by 584 nucleotides
14349 and 14350 are separated by 847 nucleotides
14350 and 14351 are separated by 697 nucleotides
14351 and 14352 are separated by 1003 nucleotides
mRNA_5980: 14348 - K12592 C1D, LRP1 exosome complex protein LRP1, at 1,370,321 to 1,371,409
14348
mRNA_5981: 14349 - Hypothetical Protein, at 1,371,994 to 1,372,598
14349
mRNA_5982: 14350 - KOG0379 Kelch repeat-containing proteins, at 1,373,446 to 1,378,307
14350
mRNA_5983: 14351 - Hypothetical Protein, at 1,379,005 to 1,379,613
14351
mRNA_5984: 14352 - Hypothetical Protein, at 1,380,617 to 1,381,762
14352
Group
Condition
mRNA
_5980
mRNA
_5981
mRNA
_5982
mRNA
_5983
mRNA
_5984
14348
14349
14350
14351
14352
ypd buoyancy
40 hrs No Buoyancy Separation
-2.0
-3.0
+0.1
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.0
+0.1
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.2
+0.1
+0.8
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.3
+0.2
+0.2
-0.2
auxotrophy
Dropout Complete
-0.7
-0.0
+0.2
+0.4
-0.1
auxotrophy
YNB Glucose
-0.6
+0.0
+0.3
-0.2
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
+0.3
-0.1
-0.3
-0.5
growth on ypd
YPD
+0.5
-0.5
+0.2
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
+0.2
+0.8
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.3
+0.2
-0.3
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.9
-0.2
+0.1
-0.2
-0.2
growth on oleic acid
YNB Glucose
+0.2
-0.1
+0.3
+0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.2
+0.2
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.3
-0.0
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.6
+0.3
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.3
+0.3
-0.1
+0.5
growth on oleic acid
YNB Oleic Acid
+0.3
-0.0
+0.3
+0.6
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
+0.0
+0.3
+0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.5
+0.3
+0.7
+0.1
growth on ricinoleic acid
YNB Glucose
+0.2
+0.5
+0.4
+0.8
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.9
+0.6
+0.4
+0.3
-0.2
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