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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14351 and 14352 are separated by 1003 nucleotides
14352 and 14353 are separated by 349 nucleotides
14353 and 14354 are separated by 40 nucleotides
14354 and 14355 are separated by 323 nucleotides
mRNA_5983: 14351 - Hypothetical Protein, at 1,379,005 to 1,379,613
14351
mRNA_5984: 14352 - Hypothetical Protein, at 1,380,617 to 1,381,762
14352
mRNA_5985: 14353 - Hypothetical Protein, at 1,382,112 to 1,383,280
14353
mRNA_5986: 14354 - Hypothetical Protein, at 1,383,321 to 1,384,747
14354
mRNA_5987: 14355 - HMMPfam-F-box-like-PF12937, at 1,385,071 to 1,386,352
14355
Group
Condition
mRNA
_5983
mRNA
_5984
mRNA
_5985
mRNA
_5986
mRNA
_5987
14351
14352
14353
14354
14355
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.5
-0.2
+0.2
+0.1
auxotrophy
YNB Glucose
-0.2
+0.3
-0.3
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.2
+0.3
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.2
-0.3
+0.3
-0.2
growth on oleic acid
YNB Glucose
+0.3
-0.2
-0.2
+0.1
+0.0
growth on oleic acid
YNB Oleic Acid
+0.6
-0.1
-0.3
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.2
+0.0
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.2
-0.3
+0.3
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.8
-0.5
-0.1
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.2
+0.2
+0.1
+0.3
auxotrophy
Dropout Complete
+0.4
-0.1
-0.4
+0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.8
-0.5
+0.0
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.2
-0.4
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.5
-0.0
-0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-0.2
-0.1
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.1
+0.2
+0.3
+0.2
growth on ypd
YPD
-0.1
-0.2
+0.5
+0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
+0.1
-0.3
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
+0.8
-0.0
-0.3
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.4
+0.3
-0.0
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
-0.2
-0.1
+0.3
+0.6
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