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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14352 and 14353 are separated by 349 nucleotides
14353 and 14354 are separated by 40 nucleotides
14354 and 14355 are separated by 323 nucleotides
14355 and 14356 are separated by 136 nucleotides
mRNA_5984: 14352 - Hypothetical Protein, at 1,380,617 to 1,381,762
14352
mRNA_5985: 14353 - Hypothetical Protein, at 1,382,112 to 1,383,280
14353
mRNA_5986: 14354 - Hypothetical Protein, at 1,383,321 to 1,384,747
14354
mRNA_5987: 14355 - HMMPfam-F-box-like-PF12937, at 1,385,071 to 1,386,352
14355
mRNA_5988: 14356 - K06111 EXOC4, SEC8 exocyst complex component 4, at 1,386,489 to 1,391,232
14356
Group
Condition
mRNA
_5984
mRNA
_5985
mRNA
_5986
mRNA
_5987
mRNA
_5988
14352
14353
14354
14355
14356
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.1
+0.1
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.2
+0.2
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.5
+0.0
+0.1
-0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.0
+0.1
+0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
+0.3
+0.6
-0.7
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
+0.1
-0.1
+0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
+0.2
-0.0
+0.4
growth on oleic acid
YNB Glucose
-0.2
-0.2
+0.1
+0.0
+0.6
auxotrophy
Dropout Complete
-0.1
-0.4
+0.2
+0.2
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.3
-0.1
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.4
+0.1
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
-0.0
-0.0
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.2
+0.1
+0.3
+0.2
growth on ypd
YPD
-0.2
+0.5
+0.4
-0.2
+0.1
auxotrophy
YNB Glucose
+0.3
-0.3
+0.0
+0.1
+0.6
growth on ricinoleic acid
YNB Glucose
-0.0
-0.3
+0.5
-0.2
+0.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
+0.3
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.3
-0.0
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.3
+0.3
+0.2
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
+0.3
-0.2
+1.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.3
+0.2
-0.1
+1.6
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