Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14362 and 14363 are separated by 150 nucleotides14363 and 14364 are separated by 535 nucleotides14364 and 14365 are separated by 321 nucleotides14365 and 14366 are separated by 492 nucleotides mRNA_5994: 14362 - K14774 UTP25, DEF U3 small nucleolar RNA-associated protein 25, at 1,405,028 to 1,407,712 14362 mRNA_5995: 14363 - K14539 LSG1 large subunit GTPase 1, at 1,407,863 to 1,410,284 14363 mRNA_5996: 14364 - BLAST ran GTPase activating protein 1 [Capsaspora owcza..., at 1,410,820 to 1,412,089 14364 mRNA_5997: 14365 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1,412,411 to 1,414,490 14365 mRNA_5998: 14366 - Hypothetical Protein, at 1,414,983 to 1,417,635 14366
Group Condition mRNA_5994 mRNA_5995 mRNA_5996 mRNA_5997 mRNA_5998
14362 14363 14364 14365 14366
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.8 -0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.3 -0.0 -0.3
auxotrophy Dropout Complete N.D. N.D. -0.3 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.9 +0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.0 -0.2 -0.0
auxotrophy YNB Glucose N.D. N.D. -0.0 +0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.1 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 +0.2 -0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.1 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.4 +0.4 -0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.1 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 -0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.1 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.0 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.4 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.2 +0.3 +0.0
growth on ypd YPD N.D. N.D. -0.1 +0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.5 +0.2 -0.3
growth on oleic acid YNB Glucose N.D. N.D. +0.1 +0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.5 +0.1 -0.1
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