Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14374 and 14375 are separated by 243 nucleotides14375 and 14376 are separated by 170 nucleotides14376 and 14377 are separated by 497 nucleotides14377 and 14378 are separated by 111 nucleotides mRNA_6006: 14374 - Hypothetical Protein, at 1,437,815 to 1,438,982 14374 mRNA_6007: 14375 - Hypothetical Protein, at 1,439,226 to 1,440,523 14375 mRNA_6008: 14376 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 1,440,694 to 1,441,642 14376 mRNA_6009: 14377 - K13939 FOL1 dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase, at 1,442,140 to 1,444,838 14377 mRNA_6010: 14378 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF103473, at 1,444,950 to 1,447,121 14378
Group Condition mRNA_6006 mRNA_6007 mRNA_6008 mRNA_6009 mRNA_6010
14374 14375 14376 14377 14378
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.2 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 +0.3 N.D. -0.8
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.2 +0.1 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 -0.1 N.D. -0.3
auxotrophy Dropout Complete +0.4 -0.2 -0.2 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.9 -0.2 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 +0.2 N.D. -0.5
growth on oleic acid YNB Glucose -0.4 +0.3 -0.2 N.D. +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.1 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.2 +0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 -0.0 N.D. +0.2
growth on ypd YPD +0.4 +0.4 -0.2 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 +0.3 +0.2 N.D. +0.6
growth on ricinoleic acid YNB Glucose +0.0 +0.1 +0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.1 +0.1 N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.1 +0.1 N.D. +0.0
auxotrophy YNB Glucose +0.2 +0.2 +0.1 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.2 +0.1 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 +0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 +0.6 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.3 +0.4 N.D. +0.5
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